PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100041470021

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

NAC

Protein Properties

Length: 207aa MW: 23930.5 Da PI: 9.9585

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100041470021	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	112.5	4.5e-35	16	132	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 lp GfrFhPtdeel+ +yLk+kv + +l++ +vi+e++ ++++PwdLp ++ +++ yfF+kr+ + + t+ g Ote100041470021\|100041470021 16 LPIGFRFHPTDEELLIHYLKRKVLSLPLPA-SVIPEFEAFSFNPWDLPGEL---KEKRYFFCKRRMDLMN----KWNTDCG 88 699*************************.99***********554...4578**9987643....347899 PP NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 yWk++gkdk++l + + ++g+kkt++fy+gr+ k t+W+m+e++l Ote100041470021\|100041470021 89 YWKSSGKDKQILGAANYVIGIKKTFAFYQGRKLK---TQWIMQEFSL 132 **************************998876...******97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	3.53E-42	12	160	IPR003441	NAC domain
PROSITE profile	PS51005	43.092	16	160	IPR003441	NAC domain
Pfam	PF02365	1.3E-23	17	132	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence Send to blast
MECARKEKEN GGVNKLPIGF RFHPTDEELL IHYLKRKVLS LPLPASVIPE FEAFSFNPWD 60 LPGELKEKRY FFCKRRMDLM NKWNTDCGYW KSSGKDKQIL GAANYVIGIK KTFAFYQGRK 120 LKTQWIMQEF SLVGYLNTPF LHQRLGVQVG DWVVCRLYQR KRRARNRTAL ARNSTNDKTT 180 SFCSSFSSCS SGITEISSSE LDQEASS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	9e-31	5	161	4	169	Stress-induced transcription factor NAC1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012844037.1	5e-85	PREDICTED: NAC domain-containing protein 68
TrEMBL	A0A022QZ79	1e-83	A0A022QZ79_ERYGU; Uncharacterized protein
STRING	Migut.F00031.1.p	2e-84	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA13250	13	18