PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100042440021
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family WOX
Protein Properties Length: 112aa    MW: 13035.5 Da    PI: 10.7554
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100042440021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox52.58.1e-171501357
                                  HHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                      Homeobox 13 eeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                                  ++Leel+++ +r+psa+++++++++l    +++ ++V++WFqN++a+e++
  Ote100042440021|100042440021  1 QTLEELYRRgTRTPSADQIQHITSQLrrygKIEGKNVFYWFQNHKARERQ 50
                                  68******99**************************************97 PP
2Wus_type_Homeobox92.83.1e-302521565
             Wus_type_Homeobox 15 iLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                                   Leely++G+rtP++++iq+it++L++yGkie+kNVfyWFQN+kaRerqk+
  Ote100042440021|100042440021  2 TLEELYRRGTRTPSADQIQHITSQLRRYGKIEGKNVFYWFQNHKARERQKR 52
                                  69***********************************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.07E-9157IPR009057Homeodomain-like
PROSITE profilePS5007110.787151IPR001356Homeobox domain
PfamPF000462.2E-14150IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.603.1E-6250IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    Send to blast
QTLEELYRRG TRTPSADQIQ HITSQLRRYG KIEGKNVFYW FQNHKARERQ KRRRQLETTL  60
SDDGGEKRET SGANRTLFEV EQTKNWASPT NSSTAAEAQA KARQHVIVLI HP
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor which may be involved in developmental processes. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011084246.12e-52WUSCHEL-related homeobox 1
SwissprotQ6X7K02e-34WOX1_ARATH; WUSCHEL-related homeobox 1
TrEMBLA0A2G9GEN66e-47A0A2G9GEN6_9LAMI; Uncharacterized protein
STRINGXP_010097568.19e-46(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA46812342
Publications ? help Back to Top
  1. Guan C, et al.
    Spatial Auxin Signaling Controls Leaf Flattening in Arabidopsis.
    Curr. Biol., 2017. 27(19): p. 2940-2950.e4
    [PMID:28943086]