PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100046310031

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

BES1

Protein Properties

Length: 657aa MW: 73771.5 Da PI: 7.287

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100046310031	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	133	3.3e-41	37	175	1	131
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl.e 77 ggs+r ++++E+E++k+RER+RRai+aki+aGLR++Gny+l++raD+n+V++ L+reAGwvv +DGtt++ +g++ + Ote100046310031\|100046310031 37 GGSRRCRPQEEKERTKLRERQRRAITAKILAGLRRHGNYNLRVRADINDVIASLAREAGWVVLPDGTTFPsrtQGTRSTgG 117 6899*****************************************************************954555555563 PP DUF822 78 eaeaagssas....aspesslqsslkssalaspvesysaspksssfpspssldsisla 131 ++++a++s+s a+ +s+++++ s +s v+ k + +p +s +d s++ Ote100046310031\|100046310031 118 AQNTAVTSSSsqmpAQLTSPTSLRGISPGYRSTVDYNPGHVKGVFVPTSSPYDVSSST 175 3333333333123223334444556666667777777777777777777777766554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	2.4E-36	38	162	IPR008540	BES1/BZR1 plant transcription factor, N-terminal
SuperFamily	SSF51445	3.12E-171	219	654	IPR017853	Glycoside hydrolase superfamily
Gene3D	G3DSA:3.20.20.80	3.8E-191	222	654	IPR013781	Glycoside hydrolase, catalytic domain
Pfam	PF01373	9.5E-101	228	642	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	3.4E-63	259	273	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	3.4E-63	280	298	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	3.4E-63	302	323	IPR001554	Glycoside hydrolase, family 14
PROSITE pattern	PS00506	0	306	314	IPR018238	Glycoside hydrolase, family 14, conserved site
PRINTS	PR00842	6.5E-7	385	394	IPR001371	Glycoside hydrolase, family 14B, plant
PRINTS	PR00750	3.4E-63	395	417	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	3.4E-63	468	487	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	3.4E-63	502	518	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	3.4E-63	519	530	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	3.4E-63	537	560	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00842	6.5E-7	540	550	IPR001371	Glycoside hydrolase, family 14B, plant
PRINTS	PR00750	3.4E-63	572	594	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00842	6.5E-7	623	637	IPR001371	Glycoside hydrolase, family 14B, plant
PRINTS	PR00842	6.5E-7	638	652	IPR001371	Glycoside hydrolase, family 14B, plant

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000272	Biological Process	polysaccharide catabolic process
GO:0048831	Biological Process	regulation of shoot system development
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0016161	Molecular Function	beta-amylase activity

Sequence ? help Back to Top
Protein Sequence Length: 657 aa Download sequence Send to blast
METSNGVGVD VGVLSTGGGN RFVHHQQYQD QPTPQVGGSR RCRPQEEKER TKLRERQRRA 60 ITAKILAGLR RHGNYNLRVR ADINDVIASL AREAGWVVLP DGTTFPSRTQ GTRSTGGAQN 120 TAVTSSSSQM PAQLTSPTSL RGISPGYRST VDYNPGHVKG VFVPTSSPYD VSSSTRSQTS 180 AMIGDGGELQ NDPLLGGSID SVDNRQVVEL PTKLQEQDFS GTPYVPIYVM LPLGVINMKC 240 ELVDPDGLVK QLKLLKSIHV DGIMVDCWWG IVEAHAPHEY NWNGYRRLFQ IVRELKMKLQ 300 VVMSFHECGG NVGDDVCIPL PHWVAEIGRN NPDIFFTDRA GRRDPECLSW GVDKERVLRG 360 RTAIEVYFDY MRSFRVEFEE FFEGGVISMI VVGLGPCGEL RYPCNPVKHG WRYPGIGEFQ 420 CYDQYMLKSL QKAAEMRGHS FWARGPENTG SYNSRPHETG FFCGGGDYDG YYGRFFLSWY 480 AQVLVDHGDR VLSLAKLIFE GTQIAAKLSS MHWWYKTASH AAELMAGYYN SSNRDGYAAI 540 MSMLKRHNAA LCFGMMDHNV DFSESLADPE GLCWQVMNAA WDANIAVASE NSFSCYAREG 600 YTYLLGKAKP VSDPDRRHFS SFTYLRLKPL LMERQNLIEF ERFVKKMHGE AVVEHQT

Sequence ? help Back to Top

Protein Sequence Length: 657 aa Download sequence Send to blast

METSNGVGVD VGVLSTGGGN RFVHHQQYQD QPTPQVGGSR RCRPQEEKER TKLRERQRRA  60
ITAKILAGLR RHGNYNLRVR ADINDVIASL AREAGWVVLP DGTTFPSRTQ GTRSTGGAQN  120
TAVTSSSSQM PAQLTSPTSL RGISPGYRST VDYNPGHVKG VFVPTSSPYD VSSSTRSQTS  180
AMIGDGGELQ NDPLLGGSID SVDNRQVVEL PTKLQEQDFS GTPYVPIYVM LPLGVINMKC  240
ELVDPDGLVK QLKLLKSIHV DGIMVDCWWG IVEAHAPHEY NWNGYRRLFQ IVRELKMKLQ  300
VVMSFHECGG NVGDDVCIPL PHWVAEIGRN NPDIFFTDRA GRRDPECLSW GVDKERVLRG  360
RTAIEVYFDY MRSFRVEFEE FFEGGVISMI VVGLGPCGEL RYPCNPVKHG WRYPGIGEFQ  420
CYDQYMLKSL QKAAEMRGHS FWARGPENTG SYNSRPHETG FFCGGGDYDG YYGRFFLSWY  480
AQVLVDHGDR VLSLAKLIFE GTQIAAKLSS MHWWYKTASH AAELMAGYYN SSNRDGYAAI  540
MSMLKRHNAA LCFGMMDHNV DFSESLADPE GLCWQVMNAA WDANIAVASE NSFSCYAREG  600
YTYLLGKAKP VSDPDRRHFS SFTYLRLKPL LMERQNLIEF ERFVKKMHGE AVVEHQT

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1q6e_A	1e-142	224	650	11	444	beta-amylase
1q6f_A	1e-142	224	650	11	444	beta-amylase
1q6g_A	1e-142	224	650	11	444	beta-amylase
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011093139.1	0.0	beta-amylase 7
Swissprot	O80831	0.0	BAM7_ARATH; Beta-amylase 7
TrEMBL	A0A4D9AVA9	0.0	A0A4D9AVA9_SALSN; Uncharacterized protein
STRING	Migut.N01443.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1607	24	48

Publications ? help Back to Top
Soyk S, et al. The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation. Plant Cell, 2014. 26(4): p. 1746-1763 [PMID:24748042]