PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100051290111

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

C2H2

Protein Properties

Length: 213aa MW: 22931.7 Da PI: 8.2904

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100051290111	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	100	116	1	17
EEETTTTEEESSHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLk 17 y+C+ C+++F++k +L+ Ote100051290111\|100051290111 100 YECKTCNRTFPSKTSLQ 116 99*************98 PP
2	zf-C2H2	11.2	0.0012	125	147	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H Ote100051290111\|100051290111 125 HECSICGSEFGSGQALGGHMRRH 147 78********************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF57667	2.02E-7	99	147	No hit	No description
Pfam	PF13912	5.5E-4	99	115	IPR007087	Zinc finger, C2H2
PROSITE profile	PS50157	8.559	100	125	IPR007087	Zinc finger, C2H2
PROSITE profile	PS50157	9.369	125	147	IPR007087	Zinc finger, C2H2
Pfam	PF13912	2.5E-11	125	149	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	127	147	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence Send to blast
MFVKRKRTRR PRPASSTSSN GGAAGEFYNS LASSPTTSSG ISTTTEEDED MANCLILLAR 60 GNSPPQPEEI QTAAVENKFS SRKFAEMATA TAGKVGMFVY ECKTCNRTFP SKTSLQSDLN 120 KPKMHECSIC GSEFGSGQAL GGHMRRHRPG PAPCTTAKIP TSIESSNTTS SHEARDKARN 180 MLSLDLNLPA PPEEAEQQPR VVFAAAALVD CHY

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011089966.1	8e-76	zinc finger protein ZAT5-like
TrEMBL	A0A4D9AYX3	9e-93	A0A4D9AYX3_SALSN; Uncharacterized protein
STRING	Migut.D02294.1.p	3e-55	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1262	24	80