PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100055280121

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

WRKY

Protein Properties

Length: 230aa MW: 25942.2 Da PI: 6.2408

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100055280121	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	52.5	1e-16	64	103	21	59
-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 21 prsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 r+YYrC+s+ Cp++k+vers+ dp++++itY+++Hnh+ Ote100055280121\|100055280121 64 CRGYYRCSSSkACPARKHVERSRADPNMLIITYSSDHNHP 103 69****9989*************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	8.7E-17	64	105	IPR003657	WRKY domain
SuperFamily	SSF118290	5.75E-13	64	105	IPR003657	WRKY domain
SMART	SM00774	4.0E-9	65	104	IPR003657	WRKY domain
PROSITE profile	PS50811	19.439	65	105	IPR003657	WRKY domain
Pfam	PF03106	4.7E-13	65	103	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence Send to blast
MYSRFSSNHF VKVKNHSPGD SPTSVMPKMA SKIKRGAMGK RVISVPAKGV ERLRLKGDHL 60 LFLCRGYYRC SSSKACPARK HVERSRADPN MLIITYSSDH NHPQPSSRNI HHRPPAATTS 120 VSEEELEEDD DDDEKPRDLV HEQSDQLIEN KFSNIGEGPP EFGWLTDFES TSCIILESPI 180 LMEKRSSTDT EMAMVLSMRE EEESDLFADL GELPECSTVF RRGMAQRAAT

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022847989.1	9e-61	probable WRKY transcription factor 65 isoform X2
TrEMBL	A0A0D5YA20	1e-87	A0A0D5YA20_SALMI; WRKY protein
STRING	Migut.M01011.1.p	7e-59	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6475	23	33