PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100059540021
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 102aa    MW: 10810.2 Da    PI: 10.0097
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100059540021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.62.4e-161463255
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                                  +ykG+r++k +g+Wv+eIr+p   g +  r +lg++ tae Aa a++ a  +l+g
  Ote100059540021|100059540021 14 KYKGIRRRK-WGKWVSEIRVP---G-TpERLWLGSYATAEAAAVAHDVAFYCLRG 63
                                  8*****998.**********8...3.69*********************999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.94E-161473No hitNo description
SMARTSM003804.4E-281479IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.6E-261473IPR001471AP2/ERF domain
PfamPF008477.4E-91463IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-181471IPR016177DNA-binding domain
PROSITE profilePS5103221.3911473IPR001471AP2/ERF domain
PRINTSPR003676.1E-91526IPR001471AP2/ERF domain
PRINTSPR003676.1E-93753IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    Send to blast
MSSSSEESST AAGKYKGIRR RKWGKWVSEI RVPGTPERLW LGSYATAEAA AVAHDVAFYC  60
LRGDSSPQNL NFPLVLPAGA RAGMSPRSVQ KAASDAGLAI DA
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854922.13e-59PREDICTED: ethylene-responsive transcription factor ERF020
SwissprotQ9C9I84e-41ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A022Q2956e-58A0A022Q295_ERYGU; Uncharacterized protein
STRINGMigut.C01360.1.p1e-58(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA94942028
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]