PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100061220031
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family BES1
Protein Properties Length: 340aa    MW: 37011 Da    PI: 10.0214
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100061220031genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822156.22.3e-48889384
                        DUF822  3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaags 84
                                  + r+ptwkErEnnkrRERrRRai aki++GLRaqGnyklpk++DnneVlkALcreAGw+ve+DGttyr+ +  +++  ++g+
  Ote100061220031|100061220031  8 AARQPTWKERENNKRRERRRRAIGAKIFTGLRAQGNYKLPKHCDNNEVLKALCREAGWIVEEDGTTYRENFVEKKHGRIVGT 89
                                  579*****************************************************************99888777777766 PP
2DUF82239.32.4e-1210617571144
                        DUF822  71 kgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvls 144
                                   +g+kp+ +a++   sa++s++ss+q s++ssa++sp++sy+asp+sssfpsp + d ++++    +lp+l++l+
  Ote100061220031|100061220031 106 RGCKPP-QADTSMISANNSVCSSIQPSPNSSAFPSPIPSYQASPTSSSFPSPLRCDRNPTS---YILPFLRNLP 175
                                   699**9.99999*********************************************9985...7888887765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.7E-609161IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009742Biological Processbrassinosteroid mediated signaling pathway
GO:0042742Biological Processdefense response to bacterium
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0001046Molecular Functioncore promoter sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MTACGSLAAR QPTWKERENN KRRERRRRAI GAKIFTGLRA QGNYKLPKHC DNNEVLKALC  60
REAGWIVEED GTTYRENFVE KKHGRIVGTV IQVGMLRAIT LLAELRGCKP PQADTSMISA  120
NNSVCSSIQP SPNSSAFPSP IPSYQASPTS SSFPSPLRCD RNPTSYILPF LRNLPIPTAL  180
PPLRISNSAP VTPPLSSPTR HSKPKVQLES IPASSFTSYI PLIFAASAPS SPTRRRRFAP  240
APIPERDESD ISAVNSACWV SFQTAAPTSP TYNLVKPVAQ KTSLQGDSGG EFGWGAVAKR  300
VRGSDFEFEN GAVKAWEGEK IHEIGMDDLE LTLGSGKAHA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-221076372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-221076372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-221076372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-221076372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00073ChIP-chipTransfer from AT1G19350Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097209.11e-136BES1/BZR1 homolog protein 2-like
SwissprotQ94A433e-88BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A4D9C3631e-158A0A4D9C363_SALSN; Brassinosteroid resistant 1/2
STRINGMigut.H00192.1.p1e-126(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA94862128