PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100064060071

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

FAR1

Protein Properties

Length: 127aa MW: 15093.5 Da PI: 10.0115

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100064060071	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	42.3	2.5e-13	5	48	48	91
FAR1 48 tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +ek r+r+etr+gC+a++ v+k ++gkw vtk+++eH+H+l+p Ote100064060071\|100064060071 5 REKIVRQRVETRVGCRAMILVRKISSGKWTVTKFVKEHTHPLTP 48 367889***********************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.0E-10	6	48	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 127 aa Download sequence Send to blast
MPDKREKIVR QRVETRVGCR AMILVRKISS GKWTVTKFVK EHTHPLTPGK GQKDLIYDQY 60 PNEHDKIREL LHQLAIEKKK VAAYKRHLEM VLDQIEEHNQ SLGKKIEDIM NSVRDMESKE 120 QLDPRFY

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011098324.1	2e-75	protein FAR1-RELATED SEQUENCE 5
TrEMBL	A0A4D9BF96	7e-75	A0A4D9BF96_SALSN; Uncharacterized protein
STRING	Migut.H01929.1.p	2e-68	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA11568	23	25