PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100068940051
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family Nin-like
Protein Properties Length: 241aa    MW: 28404.2 Da    PI: 6.7177
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100068940051genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK856.7e-27129179252
                        RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                                   ++e++le+++kyF+ pi+ AAkeL+v+lTvLK++CR+++I+RWPhRkiksl
  Ote100068940051|100068940051 129 SSELQLEEIQKYFDFPITRAAKELNVGLTVLKKRCRELNIARWPHRKIKSL 179
                                   5789*********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.473114200IPR003035RWP-RK domain
PfamPF020427.7E-23132179IPR003035RWP-RK domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MASTENNQNE VGCFFLEEPP PFWSWEQQFA CVEGFNLGLH EYEPFPLGHQ MSIGSNDFED  60
ISGDLWVFDD QPSYQNVSNN VVSTHIPVQE FESNEDIRRR MYDSTHEGCP SLKRNNLEVV  120
RSRYGRQKSS ELQLEEIQKY FDFPITRAAK ELNVGLTVLK KRCRELNIAR WPHRKIKSLN  180
SLIHNVKELG LANEIEMLEE HKKMVERIPE MELTERTKKL RQACFKANYK KRRSLQHQVF  240
P
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858066.12e-75PREDICTED: protein RKD4
TrEMBLA0A2G9HV852e-92A0A2G9HV85_9LAMI; Uncharacterized protein
STRINGMigut.F01022.1.p5e-63(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA121431922