PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100069260071
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family C2H2
Protein Properties Length: 457aa    MW: 51966.8 Da    PI: 8.459
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100069260071genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.10.00029397419123
                                   EEETTTTEEESSHHHHHHHHHHT CS
                       zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                                   ++Cp C+++F++   L  H r+H
  Ote100069260071|100069260071 397 HVCPFCNRVFKNGQALGGHKRSH 419
                                   79******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003553.6931IPR015880Zinc finger, C2H2-like
PfamPF139122.0E-4931IPR007087Zinc finger, C2H2
PROSITE patternPS0002801131IPR007087Zinc finger, C2H2
SMARTSM003550.9197119IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.41197124IPR007087Zinc finger, C2H2
PfamPF139125.4E-698121IPR007087Zinc finger, C2H2
SuperFamilySSF576679.25E-898119No hitNo description
PROSITE patternPS00028099119IPR007087Zinc finger, C2H2
SuperFamilySSF576679.25E-8392419No hitNo description
SMARTSM003550.014397419IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.245397419IPR007087Zinc finger, C2H2
PfamPF139123.8E-8397419IPR007087Zinc finger, C2H2
PROSITE patternPS000280399419IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    Send to blast
MEDDQELMFV CKLCFKKYPC GKSLGGHMRS HLLSNSAESD EKLDPNMNRY STFVVEGAIS  60
DPKIGDFGNG QSSYGLRENP RKSWRAVDSN FPLPQEKICK QCGKKFHSLK ALCGHMACHS  120
DKDRGLKDDH SWTSESQKLV NDSYSDTEAE DQIVRTRSSK RFKKIIVRSP SSISEIDGEE  180
QEEVALCLMM LSRDSSFKFG VNSFMESSDN NSVILETKSS SIDTRPGKRG TGSKVYNQDE  240
TPKFKKIRDV NLKKSAFDAE IAEIENSDSG YFLDECARAE TDVSIDGFRR KKNEYDYGID  300
ESRKGRYSNE LYRDYETIKQ NDPNTSQKRH KYECFNCKKS FXXXXXYQAL GGHRPCHKKS  360
NALYESRYES GDDSTEFVAR SKLVESKKRK AKKNKGHVCP FCNRVFKNGQ ALGGHKRSHF  420
IGGHEVNNNP KPVSKLNLLD LNLPAPQDDG NERYSPC
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070953.10.0zinc finger protein 91-like
TrEMBLA0A2G9HWQ10.0A0A2G9HWQ1_9LAMI; Uncharacterized protein
STRINGMigut.E00055.1.p1e-150(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13432255