PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100069700071

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

FAR1

Protein Properties

Length: 251aa MW: 28219.9 Da PI: 6.3166

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100069700071	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.2	1.6e-24	65	153	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkle 82 Y++YA+ +GF+vr+ k+++ +++i ++t++Cskeg ++++ ++ ++ +++etrtgCka++ +++g+w+v++++ Ote100069700071\|100069700071 65 LYCDYATAMGFNVRRGKQYYFMGTKRIRSKTYCCSKEGVKDDKADN-NSVGYKKPETRTGCKAMISFICDDSGQWKVSRFV 144 69**************************************9999.899999************************ PP FAR1 83 leHnHelap 91 +eHnH++ap Ote100069700071\|100069700071 145 KEHNHDMAP 153 ***9975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.6E-21	65	153	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence Send to blast
MENTGFELVP HEAACGDSDE EGVALPRSVG EVVDVNEGQD EGHIVELEKK LLEQVVYSEE 60 EAYMLYCDYA TAMGFNVRRG KQYYFMGTKR IRSKTYCCSK EGVKDDKADN NSVGYKKPET 120 RTGCKAMISF ICDDSGQWKV SRFVKEHNHD MAPSYAKPSV KSGQAILAAN VYGNGVALES 180 LSEHDKIREL SLQLAIAKNR AETSEKLAAT YKRQLHMIVG HIEEHNQFLS KKVQKVLNNV 240 KELESEDLKK L

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012846482.1	1e-156	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A4D8YWH6	1e-163	A0A4D8YWH6_SALSN; Uncharacterized protein
STRING	Migut.J01148.1.p	1e-155	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA14517	7	9