PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100071510191
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 154aa    MW: 17061.1 Da    PI: 4.3276
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100071510191genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.20.0003313432554
                                  CTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                           HLH 25 ellPk.askapskKlsKaeiLekAveYIksL 54
                                  + l + +s+++s+ ++Ka+i+  A +YI +L
  Ote100071510191|100071510191 13 QKLEQlRSATNSTSVNKASIVVDASRYIEEL 43
                                  44444344569999**************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.0E-42459IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS516718.65880152IPR002912ACT domain
CDDcd048732.31E-489145No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MSSRNKKKEA LYQKLEQLRS ATNSTSVNKA SIVVDASRYI EELKDKVETL NQDVASIQSS  60
TRRDSLPAVK VETLEKGFLI NVLSEKNCPG LLVSILEAFE ELGLDVLDAR VSCSDNFRLE  120
AVGENEGQSD SIDAQVIKQA VLQAISNWQD EQDD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028120874.12e-76transcription factor SCREAM2-like isoform X2
TrEMBLA0A2G9HE701e-84A0A2G9HE70_9LAMI; Uncharacterized protein
STRINGVIT_08s0058g00960.t013e-73(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2945911