PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100073260021
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family GRAS
Protein Properties Length: 46aa    MW: 5177 Da    PI: 4.6649
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100073260021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS40.83.4e-13137339374
                          GRAS 339 lllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                                   +ll+ ++ +dgyrv+e++g+l+lgW++rpL+++SaW+
  Ote100073260021|100073260021   1 MLLALFAgGDGYRVDENNGCLMLGWHTRPLIATSAWK 37 
                                   69999999****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF035141.2E-10137IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 46 aa     Download sequence    Send to blast
MLLALFAGGD GYRVDENNGC LMLGWHTRPL IATSAWKLWV TEINLE
Functional Description ? help Back to Top
Source Description
UniProtProbable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019419390.12e-21PREDICTED: DELLA protein GAI-like
SwissprotQ8S4W75e-21GAI1_VITVI; DELLA protein GAI1
TrEMBLA0A2U7PV083e-20A0A2U7PV08_9ROSI; Gibberellic acid-insensitive protein
STRINGXP_002527794.13e-20(Ricinus communis)