PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100078030021

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

Trihelix

Protein Properties

Length: 282aa MW: 32426.2 Da PI: 5.0853

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100078030021	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27	1.2e-08	58	139	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 Wt++e l+L++ ++ + +r++l+ W+ev++k+ +e +er+ +qC+++++ +++ +s+++y Ote100078030021\|100078030021 58 WTEHESLVLLDSWGDRFLKHGRKSLRSEEWQEVAEKVsQESRIERTDTQCRNRLDTXXXXXXXXXXXLGDG----HSEWVY 134 ***********************************888899*********99888888888888875....447888 PP trihelix 82 fdqle 86 f++++ Ote100078030021\|100078030021 135 FKKID 139 88876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	2.8E-13	57	140	No hit	No description
PROSITE profile	PS50090	6.458	58	115	IPR017877	Myb-like domain

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence Send to blast
MSRMNDEDDV AYNSNNHAIN GQKFPSENVR YPRDIAPPPA PPSVPKPSYG GRNPLTDWTE 60 HESLVLLDSW GDRFLKHGRK SLRSEEWQEV AEKVSQESRI ERTDTQCRNR LDTXXXXXXX 120 XXXXLGDGHS EWVYFKKIDT LLSAQMQETG LSCRVDSGEY EFTHPKVDQN RKNGSDEMMD 180 SPGNLTEGEG DESDGLPPKK AKKEQRKGGG ASFKMVADCF RRFSEIYERI ESSKRVQMVE 240 LEKMRMEFHR DLELQKREIL ERAQADIAKI RTGDEEAENF SG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011072329.1	1e-111	trihelix transcription factor ASIL1-like
Refseq	XP_011072330.1	1e-111	trihelix transcription factor ASIL1-like
TrEMBL	A0A067KQH9	1e-107	A0A067KQH9_JATCU; Uncharacterized protein
STRING	cassava4.1_009108m	1e-105	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7230	24	31