PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100085060091

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

ZF-HD

Protein Properties

Length: 120aa MW: 13806.4 Da PI: 7.2623

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100085060091	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	36.2	1.4e-11	3	50	4	56
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRre 56 rY eClk G +DGC+Ef ++ + C AC CHR+FHR+ Ote100085060091\|100085060091 3 ERYGECLKTFERFDG--KTDGCQEFSNNFV---YGDKNICDACSCHRSFHRKV 50 689**99876666..48**99833...347789**********97 PP
2	ZF-HD_dimer	47.6	4e-15	59	113	2	58
ZF-HD_dimer 2 ekvrYkeClkNhAaslGgh.avDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 ++v+Y C+k s G+h +vDGC+ f ps geeg++++lkCa C C R+FH ++ + Ote100085060091\|100085060091 59 TEVVYTRCQKIR--SFGSHlSVDGCQRFRPS-GEEGSPESLKCAVCSCDRDFHYQDRK 113 5789**9975..79999679****9.999****************87765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04770	1.7E-9	4	51	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDom	PD125774	0.003	4	49	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	12.095	5	50	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Pfam	PF04770	8.1E-14	61	111	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	14.081	63	111	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDom	PD125774	1.0E-6	77	111	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 120 aa Download sequence Send to blast
MEERYGECLK TFERFDGKTD GCQEFSNNFV YGDKNICDAC SCHRSFHRKV EPPPPPVRTE 60 VVYTRCQKIR SFGSHLSVDG CQRFRPSGEE GSPESLKCAV CSCDRDFHYQ DRKYISLSTS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G9FYB1	1e-23	A0A2G9FYB1_9LAMI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA19834	2	3