PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100086320041
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 231aa    MW: 26031.6 Da    PI: 10.1358
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100086320041genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH278.3e-0960971355
                                  HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                                  R++ N+++ +L+e++P++      K   a+iLe +++YI++Lq
  Ote100086320041|100086320041 60 RQKFNEKMKTLQEIIPNC-----SKSGQASILEDTIKYIQKLQ 97
                                  99***************9.....6888999************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.27E-1246106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.9444796IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-453102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.86E-75697No hitNo description
Gene3DG3DSA:4.10.280.104.8E-1160106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.5E-66097IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MVDHGPRRVA FPSDGVGKES RDQRNQTNEC EDPMTIKQHK QSRSPQGYKL RRSVCRRLSR  60
QKFNEKMKTL QEIIPNCSKS GQASILEDTI KYIQKLQYQL HLMMSTRAGC CPIPQSWQPG  120
TQISSFAPFL ETIKWSTDKM KYEIATPTPS MLTASGSFRI SGNQPSMISP QQSCRRTGGS  180
RSTMRVLPTQ IVPPQDHVNE DHQSQSGYSL AAQIQNEKAL GSFLFGTNFT S
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1524888