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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Ote100092430081 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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| Family | FAR1 | ||||||||
| Protein Properties | Length: 162aa MW: 17662.8 Da PI: 4.4925 | ||||||||
| Description | FAR1 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | FAR1 | 31.5 | 5.7e-10 | 64 | 115 | 39 | 91 |
FAR1 39 gkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91
g ++++ ++ + +++etrtgC+ ++ +++g+w+ +++++eHnHe+ap
Ote100092430081|100092430081 64 GAKDDKADT-NGVGYKKPETRTGCRGMISFVCDDSGQWKASRFVKEHNHEMAP 115
444444444.66667999********************************975 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Pfam | PF03101 | 2.3E-7 | 66 | 115 | IPR004330 | FAR1 DNA binding domain |
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 162 aa Download sequence Send to blast |
MENIGFELVR HEAACGDSDE EGVAPPRSVG EVVDVNVGQD DAHILELEKE QVAYSEEEAY 60 MLEGAKDDKA DTNGVGYKKP ETRTGCRGMI SFVCDDSGQW KASRFVKEHN HEMAPPYAKP 120 LVKSGQAILA AKVYGNGGAL ESLVSIACFP YSCFHSWQCV IC |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_011093603.1 | 5e-75 | uncharacterized protein LOC105173527 isoform X2 | ||||
| TrEMBL | A0A4D8YWH6 | 5e-72 | A0A4D8YWH6_SALSN; Uncharacterized protein | ||||
| TrEMBL | A0A4D9A755 | 1e-67 | A0A4D9A755_SALSN; Uncharacterized protein | ||||
| STRING | Migut.J01148.1.p | 7e-73 | (Erythranthe guttata) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Asterids | OGEA14517 | 7 | 9 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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