PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100092660031
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 199aa    MW: 22349 Da    PI: 10.4404
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100092660031genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP225.92.4e-0871124255
                           AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtae....eAakaaiaarkkleg 55 
                                    y+GVr+++ +grW AeIrd       r r++l            Aa+a++aa+++l+g
  Ote100092660031|100092660031  71 SYRGVRRRP-WGRWSAEIRDrI----GRCRHWLXXXXXXXxxxxXAARAYDAAARRLRG 124
                                   6********.**********22....249999999888547888*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.2E-1571138IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-1171133IPR016177DNA-binding domain
PROSITE profilePS5103216.13371132IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.7E-1771132IPR001471AP2/ERF domain
PRINTSPR003674.9E-117283IPR001471AP2/ERF domain
PRINTSPR003674.9E-11114134IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MNRNCNFNPN LHFFPSFSSS NLTLQPDSSF SQPPVLEGIA AVVGERILYG AKRFDLEEVD  60
ASADPHHQRT SYRGVRRRPW GRWSAEIRDR IGRCRHWLXX XXXXXXXXXX AARAYDAAAR  120
RLRGSGARTN FQIPPVLPSP STTTSCDKPK RQKSRANCTR RCAVVTCAAQ LFSPNSATET  180
GNDVNLEDDD SSNKKTRVS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017251324.15e-38PREDICTED: ethylene-responsive transcription factor ERF084
TrEMBLA0A4D9AD228e-39A0A4D9AD22_SALSN; EREBP-like factor
STRINGEOY259764e-35(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA115522225