PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100093910031

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

bHLH

Protein Properties

Length: 158aa MW: 18018.1 Da PI: 8.0967

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100093910031	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.2	0.00034	2	39	17	53
HHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPk.askapskKlsKaeiLekAveYIks 53 ++ ++L +l+P +p++ ls + Le Av YI Ote100093910031\|100093910031 2 KTLCFKLASLIPDhHLPQPKEFLSQQDQLEYAVAYIEI 39 667789*****654555555************75 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	8.58E-5	1	64	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 158 aa Download sequence Send to blast
MKTLCFKLAS LIPDHHLPQP KEFLSQQDQL EYAVAYIEIL TGRIEELRRR KAHLMNTNKM 60 MDYCTNEGRI ESKLQPNLTV KELGSCVEVI LVTGLEKGFR LRDVITIIEQ EAAEVYTIGV 120 SKLPDKTIHT IHAQVKISRV GVDVARISQR IHELISLV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011087146.1	2e-49	uncharacterized protein LOC105168709
TrEMBL	A0A4D9A3E4	3e-57	A0A4D9A3E4_SALSN; Uncharacterized protein
STRING	cassava4.1_017345m	2e-43	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6083	14	23