PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100098020031
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family G2-like
Protein Properties Length: 210aa    MW: 23706 Da    PI: 6.267
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100098020031genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like41.52.9e-131439126
                       G2-like  1 kprlrWtpeLHerFveaveqLGGsek 26
                                  kprl+Wtp+LH+rFv+av+qLGG+++
  Ote100098020031|100098020031 14 KPRLKWTPDLHQRFVDAVKQLGGPDQ 39
                                  79*********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.1E-121296IPR009057Homeodomain-like
TIGRFAMsTIGR015574.0E-81439IPR006447Myb domain, plants
PfamPF143792.2E-2069116IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MPQEMKLLLS TDAKPRLKWT PDLHQRFVDA VKQLGGPDQI QTGAKSTIPE TREFGQRRES  60
DNKIFLCSVQ VAKALEMQMD VQRKLQQQIE VQKHLQLRIE AQGKYLQSVL KKAQETLSGY  120
RACSIEVEHA RAQLSQLASM VDCSCTCSIE SSLTSSESSG YNENGKRRCV AEEMNPVXXX  180
XXXXXDIDLN VLNLEIDLNC NGFQLFGSTF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021998854.14e-55myb family transcription factor PHL8-like isoform X5
SwissprotF4I2745e-40PHL8_ARATH; Myb family transcription factor PHL8
TrEMBLA0A0B0P4F65e-50A0A0B0P4F6_GOSAR; Myb family transcription factor APL
STRINGMigut.E00086.1.p9e-51(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA60361932
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]