PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100098800091
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 215aa    MW: 23862 Da    PI: 7.7384
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100098800091genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.30.000153482153
                                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
                           HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53
                                  +r  + erE+  R+++N++f  L   l  +    ++ + Ka++L +A++ +k+
  Ote100098800091|100098800091 34 KRIHKAEREKMKREHLNESFLALANSLELS----DQNNGKASVLIEATRSMKD 82
                                  688899*********************998....7899999999999987775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.22E-43188No hitNo description
Gene3DG3DSA:4.10.280.105.7E-732102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.2643383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.58E-1034112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MQPDIAPIIS SKMAMETSTS GDVSSKKNHG KIPKRIHKAE REKMKREHLN ESFLALANSL  60
ELSDQNNGKA SVLIEATRSM KDMLAQIESL RKENAALLTE SQYVTVEKSE LKDDNSALMA  120
DIDKLRTEIK SKVSNLQLDL NLSPSENHNH DNGALVFPLV QHGGQISTFC ANFQACQEVG  180
AEQLASKHIS TVRKPHARYL TAADKWPSQV LEKQS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012853013.12e-91PREDICTED: transcription factor bHLH47-like
TrEMBLA0A4D9BIV41e-102A0A4D9BIV4_SALSN; Uncharacterized protein
STRINGMigut.D01831.1.p6e-91(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43071934