PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100103630021

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

Dof

Protein Properties

Length: 253aa MW: 27975.9 Da PI: 4.4555

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100103630021	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	91	9.8e-29	36	94	6	61
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGa...lrnvPvGggrrknkks 61 +cprC s+ntkfCyynnys sqPryfCkaCrryWtk vPvGgg+rk+++s Ote100103630021\|100103630021 36 PNCPRCASSNTKFCYYNNYSFSQPRYFCKACRRYWTKXXXxxxXXXVPVGGGCRKSRRS 94 58********************************9865111578********987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	6.0E-20	22	93	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	4.0E-24	36	93	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	23.235	36	93	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence Send to blast
MMFSCTTTTV DPYSNSMPIA PLLTTKWKYN NIEIAPNCPR CASSNTKFCY YNNYSFSQPR 60 YFCKACRRYW TKXXXXXXXX XVPVGGGCRK SRRSRAANRQ ADGPNYANTV AAVGATVSTK 120 GSDNGACIDM ADVFAKYVNQ KVDSEESAST GSSSDNGQQS CRLEEINTIV EGEKPLDDLI 180 GDPTMDHLST FHDVSSQQFV YQDCDGFELQ QGVLCDEEIL WSEGTTPVVE QALVQVEDCG 240 LLVPDNDQLR ISA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011069612.1	2e-59	dof zinc finger protein DOF1.2
TrEMBL	A0A2G9GED8	8e-59	A0A2G9GED8_9LAMI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419