PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100111560021
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 179aa    MW: 20488.9 Da    PI: 7.1497
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100111560021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP225.53.3e-0867982556
                           AP2 25 ngkrkrfslgkfgtaeeAakaaiaarkklege 56
                                  +gkr+r +lg+f tae+Aa a+++ + +l+g+
  Ote100111560021|100111560021 67 RGKRTRLWLGTFHTAEDAALAYDRQAFSLRGH 98
                                  4467*************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103212.65536105IPR001471AP2/ERF domain
SMARTSM003801.1E-1136111IPR001471AP2/ERF domain
CDDcd000181.65E-1667107No hitNo description
SuperFamilySSF541719.15E-1268106IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.4E-1769106IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MTPPPMKKNK QPSHTRNPNS KLTFPFALDD DPQRWHFLGL PISHQHGDTK MICFADNESI  60
DSRKLYRGKR TRLWLGTFHT AEDAALAYDR QAFSLRGHNA RLNFPHLFLP PTEDHVPSNL  120
HKYKPQDNDC SRHPHPLTSC DGLSDTANEG FQDSFNILDS FNLPHFTSID EILCARDAV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022140638.12e-17ethylene-responsive transcription factor ERF054-like
RefseqXP_023756358.12e-17ethylene-responsive transcription factor ERF071-like
TrEMBLA0A2G9HYM41e-21A0A2G9HYM4_9LAMI; Uncharacterized protein