PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100114490031
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 141aa    MW: 16577.5 Da    PI: 11.3969
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100114490031genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.5e-182978356
                           AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                                  y+GVr ++ +g+Wv+eIr+p++   ++r++lg+f  +e+Aa+a++ a+ +l+g+
  Ote100114490031|100114490031 29 YRGVRKRR-WGKWVSEIREPKK---KTRIWLGSFPAPEMAARAYDVAAYCLKGH 78
                                  9****887.**********854...6*************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.262885IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-192883IPR016177DNA-binding domain
SMARTSM003806.0E-332891IPR001471AP2/ERF domain
PfamPF008475.3E-122878IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.2E-292883IPR001471AP2/ERF domain
CDDcd000181.98E-282983No hitNo description
PRINTSPR003671.3E-92940IPR001471AP2/ERF domain
PRINTSPR003671.3E-95167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    Send to blast
MEQPPPCDND HQXXXXXXXX XXXXXXXXYR GVRKRRWGKW VSEIREPKKK TRIWLGSFPA  60
PEMAARAYDV AAYCLKGHKA QLNXXXXXXX XXXXTKSSCC RGPPPPPPET FRPRRPWPPR  120
WRRRKPTPSF RATEGMIFGL K
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1429831570Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020553677.12e-35ethylene-responsive transcription factor ERF023-like
TrEMBLA0A2G9HIK16e-35A0A2G9HIK1_9LAMI; Uncharacterized protein
STRINGMigut.N01538.1.p1e-32(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA138741314