PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100116100001
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 121aa    MW: 13729.6 Da    PI: 10.9928
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100116100001genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.22e-0897117223
                           AP2   2 gykGVrwdkkrgrWvAeIrdps 23 
                                    y+GVr+++ +g+WvAeIr p 
  Ote100116100001|100116100001  97 LYRGVRQRH-WGKWVAEIRLPQ 117
                                   59******9.*********984 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.01E-597117IPR016177DNA-binding domain
PROSITE profilePS5103210.86397121IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.1E-1097119IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    Send to blast
MATIQQNTAP FPPENVGFSL SQLILSSNSN TLDSIFSHCQ TANSVGQAVT EPLGTSVYLR  60
QRDLLRKFSD ENPSVSRIPA SNPVHFPTYF SPSKKKLYRG VRQRHWGKWV AEIRLPQNRM  120
R
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854160.11e-51PREDICTED: ethylene-responsive transcription factor ERF061
TrEMBLA0A4D9AEW66e-55A0A4D9AEW6_SALSN; EREBP-like factor
STRINGMigut.A00662.1.p5e-51(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36012345