PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100120600101

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

bHLH

Protein Properties

Length: 260aa MW: 28791.1 Da PI: 5.8067

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100120600101	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.6	1.4e-10	181	221	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ L+ l+P+ +K++ +++Le+Av+Y+k Lq Ote100120600101\|100120600101 181 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 221 9****************97.....8****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	15.224	171	220	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.44E-14	171	237	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.1E-12	176	231	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.3E-11	177	226	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	7.11E-12	180	225	No hit	No description
Pfam	PF00010	7.0E-8	181	221	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence Send to blast
MEGAETICVG EWNSSFNSDE ADFMAKLFGN CSLPNAAAFW GGDESNSGIE TATMFSFSLG 60 SNSSNLMAMD FCTMDGSNNV MDGDDVSNDE PPHSLQEDKM SSRKRPRVLG ESQRSKKLKK 120 RVQVIHDSNN VVLHRQSSSG CLSEDDSSVL NSSSSSKRNE GQKSKRASRG SATDPQSLYA 180 RKRRERINER LRILQNLVPN GTKVDISTML EEAVQYVKFL QLQIKLLSSD DMWMYAPIAY 240 NGMGIGLDFN IPSPKPQSYT

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012836777.1	7e-76	PREDICTED: transcription factor bHLH54-like
Swissprot	Q7XHI9	4e-53	BH084_ARATH; Transcription factor bHLH84
TrEMBL	A0A4D8ZSH8	4e-97	A0A4D8ZSH8_SALSN; Uncharacterized protein
STRING	Migut.B00443.1.p	5e-72	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA639	22	101