PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100122340001
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 124aa    MW: 13552.1 Da    PI: 10.6945
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100122340001genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.63.9e-0797121529
                                   HHHHHHHHHHHHHHHHHHHHCTSCC CS
                           HLH   5 hnerErrRRdriNsafeeLrellPk 29 
                                   h+++Er RR+ri +++  L++l+P+
  Ote100122340001|100122340001  97 HSIAERLRRERIAERIRALQDLVPS 121
                                   99**********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.06E-790123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.27492124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.1E-796122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-497121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    Send to blast
MANNPGEASS DDFFEQILGY PSYAVGSDAK QGKGGFNDAS GSGKRFQRDD VLDSRAISVK  60
GGFHGQPMAN NIQQTAPHPP AIRPRVRARR GQATDPHSIA ERLRRERIAE RIRALQDLVP  120
SVNK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831677.17e-58PREDICTED: transcription factor UNE12
SwissprotQ93Y001e-25BH007_ARATH; Transcription factor bHLH7
TrEMBLA0A022S2E72e-56A0A022S2E7_ERYGU; Uncharacterized protein
STRINGMigut.D00370.1.p3e-57(Erythranthe guttata)