PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100126670031

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

Protein Properties

Length: 192aa MW: 22076.2 Da PI: 9.8477

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100126670031	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	65.1	1e-20	16	105	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvv 81 ffkv +++ l+s++l +p +f++e++ s +++l++ +g+ W v + +k++++++l++GWk Fv+ + k+g+f+ Ote100126670031\|100126670031 16 FFKVV-TPSILTSHQLLIPPDFIKEFKRT--ISEKVILTNADGKAWYVDV--NKTRDGVFLKNGWKTFVDYHCFKVGEFLF 91 78887.667777778********9744..8889***********..************************* PP EEE-SSSEE..EEEEE CS B3 82 Fkldgrsefelvvkvf 97 F+++g+ +f vk++ Ote100126670031\|100126670031 92 FRYEGHYSF--SVKIY 105 **99888..77766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50863	14.621	15	108	IPR003340	B3 DNA binding domain
Gene3D	G3DSA:2.40.330.10	2.2E-23	15	110	IPR015300	DNA-binding pseudobarrel domain
CDD	cd10017	2.93E-17	16	105	No hit	No description
SuperFamily	SSF101936	6.67E-23	16	110	IPR015300	DNA-binding pseudobarrel domain
Pfam	PF02362	4.3E-18	16	105	IPR003340	B3 DNA binding domain
SMART	SM01019	1.7E-13	16	108	IPR003340	B3 DNA binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence Send to blast
MAKPRRGRPT RIGAEFFKVV TPSILTSHQL LIPPDFIKEF KRTISEKVIL TNADGKAWYV 60 DVNKTRDGVF LKNGWKTFVD YHCFKVGEFL FFRYEGHYSF SVKIYGTNGC IKDTFQSKNI 120 ISHANFEEET DEETKPKQTS LKRPLKRTKH SESSGEVNEA RKEVGLYENS PCFTSHSRGP 180 KNHILVEVVS PL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011086144.1	3e-39	putative B3 domain-containing protein At5g66980
TrEMBL	A0A2G9HI80	9e-51	A0A2G9HI80_9LAMI; Uncharacterized protein
STRING	Migut.B01169.1.p	2e-32	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3779	22	44