PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100128810001
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 149aa    MW: 17046.6 Da    PI: 10.8166
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100128810001genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.7e-1861110255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                    ykGVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  Ote100128810001|100128810001  61 IYKGVRMRV-WGKWVSEIREPRK---KSRIWLGTFATPEMAARAHDVAALAIKG 110
                                   69****999.**********843...6***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.65E-2560114No hitNo description
PfamPF008471.1E-1260110IPR001471AP2/ERF domain
SMARTSM003801.6E-2861124IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.9E-2761114IPR001471AP2/ERF domain
PROSITE profilePS5103220.65361139IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-1861113IPR016177DNA-binding domain
PRINTSPR003671.0E-96273IPR001471AP2/ERF domain
PRINTSPR003671.0E-984100IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MAEPPYSETE SSSLSSRENQ HKKRSRDSCC ESDEKRAKKR XXXXXXXXXX XXXXXXGKHP  60
IYKGVRMRVW GKWVSEIREP RKKSRIWLGT FATPEMAARA HDVAALAIKG KTAAXXXXXX  120
XXXXXXXXXX XXXXXXXXPP PPPSHVLPT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-13581131167Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093630.16e-32ethylene-responsive transcription factor TINY-like
TrEMBLA0A2G9GV671e-31A0A2G9GV67_9LAMI; Uncharacterized protein
STRINGMigut.J01109.1.p8e-30(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21224225