PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100135610081
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family MYB_related
Protein Properties Length: 206aa    MW: 24025.9 Da    PI: 6.526
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100135610081genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.92e-0738642248
                                  T-HHHHHHHHTTTS-HHHHHHHHHHHT CS
               Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqkyl 48
                                  g+W+ +a+  g++R +k+c++rw +yl
  Ote100135610081|100135610081 38 GRWNNVAKLAGLKRNGKSCRLRWVNYL 64
                                  35*********9*************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5009010.185764IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.605.4E-12867IPR009057Homeodomain-like
SuperFamilySSF466893.37E-131391IPR009057Homeodomain-like
PfamPF139219.5E-73778No hitNo description
Gene3DG3DSA:1.10.10.602.6E-76891IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MGWAAIEEGW RKGPWTGEED XXXXXXXXXX XXXXXXEGRW NNVAKLAGLK RNGKSCRLRW  60
VNYLRPDLKR GQITPHEERI ILQLHARWGN SPEKTRARLL RRXXXXXXXX XXXXXXEEQD  120
QIDMKRIVSW LVDEKESGAA MSYGDVVYPS DDQGSVMVMG PEEEIVWDGL WNLGDLHVVP  180
KHNYYNNFAS SXXXXXXXXX XXXXXX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073726.11e-47myb-related protein 305
TrEMBLA0A059PRE46e-52A0A059PRE4_SALMI; MYB-related transcription factor
STRINGMigut.N00319.1.p1e-42(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154