PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100135820011
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 102aa    MW: 11653.2 Da    PI: 11.4405
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100135820011genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.61e-1562102145
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAaka 45 
                                   s y+GVr +  +g+Wv+eIr+p++   + r++lg+f tae+Aa+a
  Ote100135820011|100135820011  62 SVYRGVRMRA-WGKWVSEIREPKK---KSRIWLGTFATAEMAARA 102
                                   78*****998.**********854...6***************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.11E-1462102IPR016177DNA-binding domain
PfamPF008471.5E-962102IPR001471AP2/ERF domain
CDDcd000181.51E-1962102No hitNo description
PROSITE profilePS5103217.88663102IPR001471AP2/ERF domain
SMARTSM003804.2E-1263102IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.9E-2263102IPR001471AP2/ERF domain
PRINTSPR003674.4E-116475IPR001471AP2/ERF domain
PRINTSPR003674.4E-1186102IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    Send to blast
MAXXXXXXXX XXXXXXXXXX TVSGSDSVPG PVNKLKRARD NDCKDSAHKR NKXXXXXXXP  60
HSVYRGVRMR AWGKWVSEIR EPKKKSRIWL GTFATAEMAA RA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093630.12e-23ethylene-responsive transcription factor TINY-like
TrEMBLA0A4D9AHT52e-20A0A4D9AHT5_SALSN; EREBP-like factor
STRINGMigut.K00522.1.p2e-20(Erythranthe guttata)