PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100140300101

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

GeBP

Protein Properties

Length: 258aa MW: 29664 Da PI: 9.7527

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100140300101	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	51.4	3e-16	83	156	25	97
DUF573 25 ktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaks.gkepsfskehdqkifelskkiWg 97 k + +p +d+++fy+f+++ + ++ k+ql++K+r+LK+K+++++++ k+ +f h +++ls+ iW+ Ote100140300101\|100140300101 83 KYKCDPISDMNGFYDFIRNTLPRHIAKHQLSNKVRELKRKYEDNRSRGKEfAGMREFLPRHAMRVYDLSNEIWK 156 33448999*************************************6551445689999***********7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	5.4E-14	82	156	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence Send to blast
MAEISPILSS EEESDQMQTA MQNKSQPQPX XXXXXXXXXX XXXXEESDSD SDSDGPSSNV 60 RPVATKRMRE AIDTSEKKKK RTKYKCDPIS DMNGFYDFIR NTLPRHIAKH QLSNKVRELK 120 RKYEDNRSRG KEFAGMREFL PRHAMRVYDL SNEIWKDVKS ETSRRRIIRK PSSEAVNAKG 180 DAVKSGEVKG VKVDGGGGME EMMLLNGRKM YELGEGVEGG KEWEKLKVEE LELYQKLLEL 240 RLPQTKLVLK NIRSRVAD

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3042	19	47