PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100143370031

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

bHLH

Protein Properties

Length: 258aa MW: 29150 Da PI: 4.6919

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100143370031	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.4	1.6e-10	182	222	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ L++l+P+ +K++ +++Le+Av Y+k Lq Ote100143370031\|100143370031 182 RKRRERINERLKILQTLVPNG-----TKVDISTMLEEAVGYVKFLQ 222 9****************97.....8****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	14.926	172	221	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	5.5E-14	174	238	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.7E-12	176	237	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	2.9E-11	178	227	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	3.42E-12	181	226	No hit	No description
Pfam	PF00010	5.6E-8	182	222	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence Send to blast
MEDVAAMPQG EWSSLTGMCF EEADFMAQFS IPNELLNDTN FLVSPTIWPT HRETAMYSCE 60 ETNTNMRISG CSGGSSFTFP EESYYSVTNN SLTTMDYYCT VEGKNDFLNQ DVPRNKKIKF 120 NTKFEDSDDX XXXXXXGIAV FQRQSSSNCC SEDESNGTAS RSASKATRKT RAATDPQSLY 180 ARKRRERINE RLKILQTLVP NGTKVDISTM LEEAVGYVKF LQLQIKLLSS DEHWMYAPIA 240 YNGMDIGLDL KMAIPKPQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012836777.1	3e-81	PREDICTED: transcription factor bHLH54-like
TrEMBL	A0A022RB65	7e-80	A0A022RB65_ERYGU; Uncharacterized protein
STRING	Migut.B00443.1.p	6e-82	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA639	22	101