PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100143420031
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family WRKY
Protein Properties Length: 266aa    MW: 30052.7 Da    PI: 7.0256
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100143420031genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY551.7e-17121177159
                                   ---SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 
                                   ++Dg++WrKYGqK++ +se+pr    Ct++  gC++ k+v+r + d+ + ++tY ++H+++
  Ote100143420031|100143420031 121 MEDGCAWRKYGQKTILNSEYPR----CTHKsdGCKALKQVQRLKGDQVLYQTTYFNHHTCK 177
                                   58*****************996....999888***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-17115177IPR003657WRKY domain
PROSITE profilePS5081113.563116174IPR003657WRKY domain
SuperFamilySSF1182909.94E-18118177IPR003657WRKY domain
SMARTSM007744.2E-25121178IPR003657WRKY domain
PfamPF031068.0E-17122177IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MKMGGSSSNN FHASKKNAMV KLVKGRESAI QLQTILREAV QDHEPVAVQR LADQIYRSLS  60
DSISELSFCT VSTEWGQIPA ADCGGYTCSG ESKKKPVVKD RRGCYKRRRT SDSWVKVSPT  120
MEDGCAWRKY GQKTILNSEY PRCTHKSDGC KALKQVQRLK GDQVLYQTTY FNHHTCKDSP  180
LTTPPPLIES DPVDPHLISF QSPKKQNQED NDDCNKDSSI STLEDPWQHI IGLDNLGYSH  240
PYQDEVESSL HVFDMDINHL SEFPLV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-12117177469OsWRKY45
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076580.16e-73probable WRKY transcription factor 70
TrEMBLA0A4D8YG672e-99A0A4D8YG67_SALSN; Uncharacterized protein
STRINGMigut.F00572.1.p2e-63(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61992233