PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100150500011

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

bHLH

Protein Properties

Length: 262aa MW: 29294.8 Da PI: 9.0632

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100150500011	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.5	2.8e-09	158	205	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L+ l+P + +k Ka +L + ++Y++sLq Ote100150500011\|100150500011 158 SHSLAERVRRERISERMKLLQALVPGC----DKVTGKALMLDEIINYVQSLQ 205 8***********************9....555***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	2.49E-10	152	209	No hit	No description
SuperFamily	SSF47459	7.46E-17	152	221	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.383	154	204	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	8.1E-16	154	219	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.6E-6	158	205	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	6.0E-10	160	210	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence Send to blast
MAAFSSTPFH HHHPFLLDSL LLPNSPSTTT TDNRNIMFTS PPLLHKSPNN YNFNQLQNLV 60 DNDASLVNKA SMDNSSSIVT DKYDSSEHPL TTPINNKRKH KAASSANSAQ SKDKREVKGX 120 XXXXXXXXXX XXXXXXXXXX XXXXYIHVRA KRGQATDSHS LAERVRRERI SERMKLLQAL 180 VPGCDKVTGK ALMLDEIINY VQSLQNQVEF LSMKLASVNP MFYDFGVDLE SFMVRPDHQD 240 LSPTSKCSPP AAGKQTDLVG SG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012842728.1	3e-73	PREDICTED: transcription factor bHLH137
TrEMBL	A0A0H3YB67	5e-85	A0A0H3YB67_SALMI; Basic helix-loop-helix transcription factor
STRING	Migut.O00350.1.p	1e-72	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4116	23	45