PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100151590021

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

Protein Properties

Length: 151aa MW: 16776.1 Da PI: 5.0225

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100151590021	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51.6	1.7e-16	34	120	1	94
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDf 79 f+ +l++s+v++ l++p + + e+ g + ++ + g++W+v + + k++++y+ +GW++F +n+L+ gD Ote100151590021\|100151590021 34 FDVILVKSNVGSPYHLTVPARIVHEFpsGDV-----PVV-LTHGGKKWSVLY-HGKTKKHYFENSGWRKFIADNNLEIGDA 107 778999*****99****88853333.....344.55699***.56777778899************* PP EEEEE-SSSEE..EE CS B3 80 vvFkldgrsefelvv 94 ++F+ +++s++ +v Ote100151590021\|100151590021 108 CIFEIMESSRK--LV 120 **8764443..33 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.40.330.10	7.1E-18	28	129	IPR015300	DNA-binding pseudobarrel domain
SuperFamily	SSF101936	5.69E-19	29	122	IPR015300	DNA-binding pseudobarrel domain
CDD	cd10017	2.08E-17	32	128	No hit	No description
PROSITE profile	PS50863	12.844	34	130	IPR003340	B3 DNA binding domain
SMART	SM01019	1.5E-7	34	130	IPR003340	B3 DNA binding domain
Pfam	PF02362	2.0E-14	34	120	IPR003340	B3 DNA binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 151 aa Download sequence Send to blast
MDEETLNAGP ISSSATAESD VDELPCLSGD KPFFDVILVK SNVGSPYHLT VPARIVHEFP 60 SGDVPVVLTH GGKKWSVLYH GKTKKHYFEN SGWRKFIADN NLEIGDACIF EIMESSRKLV 120 RLRVVILRNT IELPPELRVA GETLETAIEL D

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A4D8Y7F8	5e-39	A0A4D8Y7F8_SALSN; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1819	21	54