PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100153590071
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family WRKY
Protein Properties Length: 126aa    MW: 14257.2 Da    PI: 10.4793
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100153590071genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY33.96.1e-11105126122
                                   ---SS-EEEEEEE--TT-SS-E CS
                          WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                                   ldDgy+WrKYGqK+vk++++pr
  Ote100153590071|100153590071 105 LDDGYKWRKYGQKVVKNTQHPR 126
                                   59*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-1290126IPR003657WRKY domain
SuperFamilySSF1182901.01E-997126IPR003657WRKY domain
PROSITE profilePS5081113.528100126IPR003657WRKY domain
PfamPF031064.5E-7106126IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    Send to blast
MSSASQTMMN QSLFEDQQDM IMSSHLGILP FLHTNFSSSS SSSSLPLGAW GELSDCMGMK  60
RGGGXXXXXX XXXGVSTMKM KKIKARRKVR EPRFCFKTMS DVDVLDDGYK WRKYGQKVVK  120
NTQHPR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011100913.21e-43probable WRKY transcription factor 13
TrEMBLA0A0D5YA098e-47A0A0D5YA09_SALMI; WRKY protein
STRINGVIT_07s0031g01840.t012e-37(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA103762126