PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100156430051

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

bHLH

Protein Properties

Length: 202aa MW: 22844.2 Da PI: 4.6858

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100156430051	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12	0.0004	30	63	7	51
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51 E+ RR+++N+++ Lr+++ ka ++++ A+eYI Ote100156430051\|100156430051 30 VSEKIRRKKLNDRLYALRSVMDKA-----------STVKDAIEYI 63 569***************998655...........7777777777 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	2.74E-6	26	71	No hit	No description
SuperFamily	SSF47459	2.75E-10	26	83	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.9E-6	29	72	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	4.0E-6	30	87	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence Send to blast
MLLQLDELGC SYMEERVSVG GEGGLSRNIV SEKIRRKKLN DRLYALRSVM DKASTVKDAI 60 EYIEWMHSEE RRIQAEIWEM ESKTRMENTD YSCVSTSAPS LXXXXXXXXI QILELRVRSM 120 REEKMIVVSL TCSKAGRDDA LVKLCEMFES LNLQIITATI SSSSGRLCNT LLLQGDDEEE 180 VLSFKIKTAI EALNDPGSSI SI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011094110.1	7e-55	transcription factor bHLH35
Swissprot	Q2HIV9	1e-39	BH035_ARATH; Transcription factor bHLH35
TrEMBL	A0A4D9BI30	3e-55	A0A4D9BI30_SALSN; Uncharacterized protein
STRING	XP_009603227.1	5e-51	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2923	24	51