PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100158720061
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family C2H2
Protein Properties Length: 232aa    MW: 25369.4 Da    PI: 9.1106
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100158720061genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.000473046319
                                  ETTTTEEESSHHHHHHH CS
                       zf-C2H2  3 CpdCgksFsrksnLkrH 19
                                  C  C+k+Fs++ +L  H
  Ote100158720061|100158720061 30 CRVCDKVFSDNVSLLLH 46
                                  **************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.6422855IPR007087Zinc finger, C2H2
PROSITE patternPS0002803050IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MSLSKLNSGN ADPFENGRRP SGSPPVPIAC RVCDKVFSDN VSLLLHFECH MNVEFRQRGN  60
DLASLHGGHQ SSSSWAPCSH SSSARLNKDH NAFSSLNDCF RPHSLPAKRK KTDHNRLYIP  120
VINVMPSVSP STNPQLNGSQ PIHNSSMGRY GGISSFSCPS MSSALDARNS ACGLRVAPPH  180
LRKRNGGQKR SPGYKKSPIS EVGKYNQEII ILSDDEEEDN KSVTEIDSTL KL