PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100162300001
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family NAC
Protein Properties Length: 249aa    MW: 28877.1 Da    PI: 9.9357
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100162300001genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.21e-162167148
                           NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
                                  +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePw+++
  Ote100162300001|100162300001 21 VPPGFRFHPTEEELLHYYLRKKVACQKIDL-DVIRDVDLNKLEPWEIQ 67
                                  69****************************.9**************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-161770IPR003441NAC domain
PROSITE profilePS5100513.76321205IPR003441NAC domain
PfamPF023653.5E-72284IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MSSSSLSHED MNLSLNGNSK VPPGFRFHPT EEELLHYYLR KKVACQKIDL DVIRDVDLNK  60
LEPWEIQGXX XXXXXXXXXX XXXXXXXXNV MFVEKCKIGS TPQNDWVGGV PSIQEEELPQ  120
GTREPPHFIP INHVQQPRTK RRRSGPANHV HGKKFFLFFF LQTRKRPHNE LHQPINRLPP  180
PTGTRKSDDD EPYEQQRRVD SVVRXXXXXX XXXXXXXXXS TAIRPSSFPA TLTTMISPSR  240
SITMIRYIN