PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100162500061
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 247aa    MW: 28184.6 Da    PI: 8.6097
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100162500061genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.78.9e-11131172351
                           AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                                    +GV+++    +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  Ote100162500061|100162500061 131 MRGVYFKN--LKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 172
                                   79***966..5********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541719.15E-8130175IPR016177DNA-binding domain
SMARTSM003801.2E-4130187IPR001471AP2/ERF domain
PfamPF008475.7E-5130173IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.2E-6137177IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MCMREVGATY VERSGFEMLD EVELKTAMVS IRRRKLLGLC SGHNYFLEPI SPNIEQGQTP  60
QDAENNTKPV SVHPLPLDYN FKPKEETSLE NGLNSSNVSA ASSASTQQFP EVKRRKRHRR  120
KQIENQEQCI MRGVYFKNLK WQAAIKVDKK QIHLGTVGSQ EEAARLYDRA AFMCGREPNF  180
ELSEEEKQEL RKFNWDEFLT ITRSAITNKK TQRRSGSGPR RKLPENDWEG EQGRSGGSAS  240
EDEALAS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089068.11e-116ethylene-responsive transcription factor-like protein At4g13040 isoform X1
TrEMBLA0A4D9BZE01e-118A0A4D9BZE0_SALSN; Uncharacterized protein
STRINGXP_010242670.11e-84(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA62462433