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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Ote100163870201 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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| Family | MYB_related | ||||||||
| Protein Properties | Length: 143aa MW: 16128.6 Da PI: 4.2248 | ||||||||
| Description | MYB_related family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 48.6 | 1.9e-15 | 10 | 50 | 1 | 43 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksr 43
rg++T eE+el+++++++lG++ W++I ++++ gRt++++k+r
Ote100163870201|100163870201 10 RGNFTREEEELIINLHAELGNK-WSAIVARLP-GRTDNEIKNR 50
89********************.*********.*********9 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Gene3D | G3DSA:1.10.10.60 | 3.0E-22 | 1 | 50 | IPR009057 | Homeodomain-like |
| SuperFamily | SSF46689 | 1.51E-15 | 1 | 59 | IPR009057 | Homeodomain-like |
| PROSITE profile | PS51294 | 20.813 | 5 | 59 | IPR017930 | Myb domain |
| SMART | SM00717 | 2.3E-13 | 9 | 57 | IPR001005 | SANT/Myb domain |
| Pfam | PF00249 | 6.7E-14 | 10 | 50 | IPR001005 | SANT/Myb domain |
| CDD | cd00167 | 5.86E-11 | 12 | 51 | No hit | No description |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 143 aa Download sequence Send to blast |
MNYLRPDIKR GNFTREEEEL IINLHAELGN KWSAIVARLP GRTDNEIKNR CSEISSPDYS 60 LSDGSADDAS DSTMADLLDK LTETGGGFLP EIFPADEWSG GSNFSAGDSD YELRSFRHEL 120 NRGVDNGFWR DVFDRAEELT KYI |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_011080041.1 | 8e-28 | transcription factor MYB14 | ||||
| TrEMBL | A0A059PRT0 | 8e-42 | A0A059PRT0_SALMI; MYB-related transcription factor | ||||
| STRING | Migut.N02201.1.p | 1e-24 | (Erythranthe guttata) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Asterids | OGEA12 | 24 | 2154 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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