PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100166400021
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family NF-YB
Protein Properties Length: 60aa    MW: 6541.67 Da    PI: 8.9241
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100166400021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB48.52.1e-151860547
                         NF-YB  5 drflPianvsrimkkvlPanakiskdaketvqecvsefisfvt 47
                                  +  +P+  ++rim ++lP++ak+s+dake +q cvs fisf+t
  Ote100166400021|100166400021 18 EYCMPMGSLTRIMGRALPEQAKLSDDAKEAIQLCVSRFISFLT 60
                                  5679*************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.20.101.5E-121660IPR009072Histone-fold
SuperFamilySSF471134.19E-91760IPR009072Histone-fold
PfamPF008087.4E-82160IPR003958Transcription factor CBF/NF-Y/archaeal histone domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 60 aa     Download sequence    Send to blast
MGKEKGSCSG GKRGLKDEYC MPMGSLTRIM GRALPEQAKL SDDAKEAIQL CVSRFISFLT