PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100167440021
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family WRKY
Protein Properties Length: 143aa    MW: 16015.7 Da    PI: 7.8443
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100167440021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY30.76.3e-10122143122
                                   ---SS-EEEEEEE--TT-SS-E CS
                          WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                                   ldDgy WrKYGqK++ g+++pr
  Ote100167440021|100167440021 122 LDDGYGWRKYGQKDILGAKHPR 143
                                   59*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081110.716117143IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.6E-7120143IPR003657WRKY domain
SuperFamilySSF1182903.92E-7121143IPR003657WRKY domain
PfamPF031061.5E-6123143IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MENFPSDSDL KNLVRELSQG RDLAKQLQNQ LNFQSSSSRE NQEFLLQRIL FSYDHALSML  60
THNDGADVLP PPPVASDSPR SLAGSPQSGE SDQDHPSRKR KTVERWSEKV KVRGGGGIEG  120
QLDDGYGWRK YGQKDILGAK HPR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076029.15e-43probable WRKY transcription factor 30
TrEMBLA0A4D9AHG82e-56A0A4D9AHG8_SALSN; Uncharacterized protein
STRINGXP_010097859.11e-37(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA117431922