PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100174440031
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family WRKY
Protein Properties Length: 211aa    MW: 23950.7 Da    PI: 6.31
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100174440031genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY32.22.2e-105070222
                                  --SS-EEEEEEE--TT-SS-E CS
                          WRKY  2 dDgynWrKYGqKevkgsefpr 22
                                  +D ++WrKYGqK++kgs++pr
  Ote100174440031|100174440031 50 SDCWSWRKYGQKPIKGSPYPR 70
                                  699*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.0E-93970IPR003657WRKY domain
SuperFamilySSF1182908.37E-84671IPR003657WRKY domain
SMARTSM007742.1E-44993IPR003657WRKY domain
PROSITE profilePS5081112.38150119IPR003657WRKY domain
PfamPF031065.7E-65170IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MQEVDKPNLE FLSTAEIHTN KKRKMRERIV VAVKIEENAK KQHRNEGPPS DCWSWRKYGQ  60
KPIKGSPYPR LIKSGDVQLC MQGVLQVQHI QGLLGQEASG EMQNRFIEAH HHLHIHPQPP  120
WPGIXXXXXX XXXSAAGLAE SPPTTPNQEQ KQESETTIDE IDEIPSTVSE DNVQSPLITT  180
SDRENELPTS SFFTAFMKNS LREERIAVNL S
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112812025