PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100183840121
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family TCP
Protein Properties Length: 183aa    MW: 20618.3 Da    PI: 4.7379
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100183840121genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP60.85.5e-1918438133
                           TCP  38 eLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssgkaaksaakskksqksaasalnlakesra 116
                                   +LG+dk+sktieWL++++k+aikel++  s+++se+  +              + +  +  +++s+ +++    + kesr+
  Ote100183840121|100183840121   1 MLGYDKASKTIEWLFNKSKKAIKELVKEMSDAKSESliS--------------ECEVMSGIEESSNIEKEGLVLPEKESRE 67 
                                   8***************************77777444211..............222333334444444444566667**** PP

                           TCP 117 karararertrekmrik 133
                                   kararar rt+ekm+ k
  Ote100183840121|100183840121  68 KARARARCRTEEKMMGK 84 
                                   **************876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.3E-11150IPR005333Transcription factor, TCP
PROSITE profilePS5136918.33125IPR017887Transcription factor TCP subgroup
PROSITE profilePS5137010.8166380IPR017888CYC/TB1, R domain
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MLGYDKASKT IEWLFNKSKK AIKELVKEMS DAKSESLISE CEVMSGIEES SNIEKEGLVL  60
PEKESREKAR ARARCRTEEK MMGKRIEDPA QLCKSSPNID ELGLSSSSLQ FNRDNRPLSQ  120
YGGDDYSPIV HQASDFGTIE KLLGNCASVD PSFVGSFGNW EGLMSNDRLN IQALMADWMW  180
FLY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020552305.17e-32transcription factor TCP12-like
TrEMBLA0A2Z7A9P13e-33A0A2Z7A9P1_9LAMI; Uncharacterized protein
TrEMBLA0A4D8ZGP17e-34A0A4D8ZGP1_SALSN; Uncharacterized protein
TrEMBLA0A4D9BNU47e-34A0A4D9BNU4_SALSN; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24362359