PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100185870031
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family TCP
Protein Properties Length: 62aa    MW: 7061.19 Da    PI: 4.6121
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100185870031genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP42.52.5e-131423874
                           TCP 38 eLGfdkdsktieWLlqqakpaikeltgtssssa.....sece 74
                                  +LG+dk sktieWL++++k+ ikel++   +++     sece
  Ote100185870031|100185870031  1 MLGYDKESKTIEWLFNKSKKTIKELVKEMCDAKsesliSECE 42
                                  8***************************44444113344442 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.1E-10142IPR005333Transcription factor, TCP
PROSITE profilePS5136916.595125IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 62 aa     Download sequence    Send to blast
MLGYDKESKT IEWLFNKSKK TIKELVKEMC DAKSESLISE CEAMMGIEES SNIEKKGLVL  60
SE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020552305.11e-15transcription factor TCP12-like
TrEMBLA0A2Z7A9P12e-15A0A2Z7A9P1_9LAMI; Uncharacterized protein
TrEMBLQ6Y9X58e-16Q6Y9X5_SCRCA; TCP protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24362359