PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100185870181
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 128aa    MW: 13885.5 Da    PI: 6.2421
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100185870181genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.11.4e-151362255
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                                  +y+GVr++k +g+Wv+eIr+p   g + +r +lg++  ++ Aa a++ a  +l+g
  Ote100185870181|100185870181 13 KYSGVRRRK-WGKWVSEIRVP---G-TsQRLWLGSYANPQAAAVAHDVATYCLRG 62
                                  8*****998.**********8...3.34*********************999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.50E-221372No hitNo description
PROSITE profilePS5103220.0071372IPR001471AP2/ERF domain
PfamPF008474.7E-91362IPR001471AP2/ERF domain
SMARTSM003802.5E-241378IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-241372IPR001471AP2/ERF domain
SuperFamilySSF541711.96E-161372IPR016177DNA-binding domain
PRINTSPR003679.0E-71425IPR001471AP2/ERF domain
PRINTSPR003679.0E-73652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    Send to blast
MSMTSSEMEA HNKYSGVRRR KWGKWVSEIR VPGTSQRLWL GSYANPQAAA VAHDVATYCL  60
RGDSSTHKLN FQLVLPAGAR FGLSPTSVQK VASDAGLAID AQLSRIAGDQ PSDNGDDECL  120
DISVEDYV
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00158DAPTransfer from AT1G22810Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854922.12e-55PREDICTED: ethylene-responsive transcription factor ERF020
SwissprotO805421e-34ERF19_ARATH; Ethylene-responsive transcription factor ERF019
TrEMBLA0A022Q2955e-54A0A022Q295_ERYGU; Uncharacterized protein
STRINGMigut.C01360.1.p9e-55(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA94942028
Publications ? help Back to Top
  1. Scarpeci TE,Frea VS,Zanor MI,Valle EM
    Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.
    J. Exp. Bot., 2017. 68(3): p. 673-685
    [PMID:28204526]