PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100187700041

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

bHLH

Protein Properties

Length: 230aa MW: 26115.9 Da PI: 6.1345

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100187700041	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.8	1.3e-10	156	196	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ L+ l+P+ +K++ +++Le+Av+Y+k Lq Ote100187700041\|100187700041 156 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 196 9****************97.....8****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	1.96E-14	143	211	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	14.951	146	195	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	5.2E-13	146	210	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.1E-11	152	201	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	6.70E-12	155	200	No hit	No description
Pfam	PF00010	6.7E-8	156	196	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence Send to blast
MEGFEAFLEG EWESLSKLFS CEDSELVLHS NGGADFFESS FDFCYANGND ASLFNSCFYS 60 VSQESSHSST FDHSXXXXXX XXXXXXXXXX XXXXXXXXXX XXXSSRTPRS KKAKKAGRET 120 TIDSNIVQSS SSEEESTAKA KGRKSRATDP QSLYARKRRE RINERLRILQ NLVPNGTKVD 180 ISTMLEEAVH YVKFLQLQIK LLSSDDKWMY APIAYNGMDI GLYQKIVPNV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A4D8ZS69	2e-56	A0A4D8ZS69_SALSN; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA639	22	101