PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100190320031
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family MYB_related
Protein Properties Length: 174aa    MW: 19773.8 Da    PI: 4.3374
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100190320031genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.31.8e-081857141
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41
                                  +g+W+ +Ed +l d+++ +G g+W+  ar     + +kq+k
  Ote100190320031|100190320031 18 KGAWSSQEDSILTDYITAHGEGRWSILARDSV-LKQAKQLK 57
                                  79****************************99.89999988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.9921364IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.602.3E-91357IPR009057Homeodomain-like
SuperFamilySSF466894.29E-61560IPR009057Homeodomain-like
CDDcd001670.001562057No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MNDEISSIER SGGEEIRKGA WSSQEDSILT DYITAHGEGR WSILARDSVL KQAKQLKYDI  60
NSMEFKELVR DVWVPRLSEQ VQLEASRCNN LDNGSEELQM INQRIDCLGD HASKLVGVPH  120
DLAMNLSEPE FGQNLHHSPY VGDGFKGDDG FANEFSYSEL WDAKLNDNYF WSCP